Parallel BWA [pBWA] :: Home:
BWA paralelo
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quinta-feira, 3 de maio de 2012
quinta-feira, 12 de abril de 2012
terça-feira, 10 de abril de 2012
Bloom filter - Wikipedia, the free encyclopedia
Bloom filter - Wikipedia, the free encyclopedia:
Bloom filter, conceived by Burton Howard Bloom in 1970,[1] is a space-efficient probabilistic data structure that is used to test whether an element is a member of a set. False positives are possible, but false negatives are not; i.e. a query returns either "inside set (may be wrong)" or "definitely not in set". Elements can be added to the set, but not removed (though this can be addressed with a counting filter). The more elements that are added to the set, the larger the probability of false positives.
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Bloom filter, conceived by Burton Howard Bloom in 1970,[1] is a space-efficient probabilistic data structure that is used to test whether an element is a member of a set. False positives are possible, but false negatives are not; i.e. a query returns either "inside set (may be wrong)" or "definitely not in set". Elements can be added to the set, but not removed (though this can be addressed with a counting filter). The more elements that are added to the set, the larger the probability of false positives.
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terça-feira, 20 de março de 2012
MSR-CA Genome Assembler, draft manual 1.0
Genome assembly com o Celera, onde a parte do overlap é trocada por uma opção de rodar com 'gráfico de Brujin'... parece que fica mais rápido para genomas enormes montados com reads curtas.
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Assembling Illumina and 454 data
Assembling Illumina and 454 data:
Hybrid Assembly... some options from a specialist's blog...
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Hybrid Assembly... some options from a specialist's blog...
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segunda-feira, 19 de março de 2012
Sequenciamento na Coréia, Macrogen
:::Welcome to Macrogen::::
Sequenciamento na Coréia. Manda-se o extrato amplificado num eppendor ou numa caixainha com um rótulo de Drosophila.
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Sequenciamento na Coréia. Manda-se o extrato amplificado num eppendor ou numa caixainha com um rótulo de Drosophila.
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